compute_polycl.RdFor multilibrary hits data, identify libraries, and call library_polycl for each.
compute_polycl(data, annot, pairs, method = "independence_filter", verbose = TRUE, parallel = FALSE)
| data | List with first element a character vector of library names and subsequent elements data frames of data for corresponding libraries. |
|---|---|
| annot | Phiplist of annotation files. |
| pairs | Phiplist of blast alignment pair files. |
| method | Character string signifying which scoring method to use for evaluation. independence_filter or old_method. |
| verbose | Logical whether or not to print progress. |
| parallel | Logical whether or not to use future and future.apply to parallelize individual library computations. |