define_plan.Rd
Initialize and return drake_plan object. New for github drake 7.0+.
define_plan(params_path = "drake_params.tsv", runCounts = TRUE, runPairwise = FALSE, runEnrichment = TRUE, runPolyclonal = TRUE, runAVARDA = FALSE)
params_path | Path to project parameters file that can be created using the write_drake_params function. |
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runCounts | Logical controlling whether or not to define counts targets. |
runPairwise | Logical controlling whether or not to define pairwise targets. |
runEnrichment | Logical controlling whether or not to define enrichment targets. |
runPolyclonal | Logical controlling whether or not to define enrichment targets. |
runAVARDA | Logical controlling whether or not to define AVARDA targets. |