Identifies next index peptide, calls indexEpitopes to parse alignments to that index peptide, and updates BLAST table accordingly.

Identifies next index peptide, calls indexEpitopes to parse alignments to that index peptide, and updates BLAST table accordingly.

epitopeBLAST(data, aln.size)

Arguments

data

List with BLAST alignment table and fasta file of peptides.

aln.size

Minimum length of alignment to consider from BLASTp alignments of 'data'.