For a specified index peptide, identify the maximal intervals that represent the consensus overlap of reported BLAST alignments to that peptide. Update the BLAST table accordingly.

For a specified index peptide, identify the maximal intervals that represent the consensus overlap of reported BLAST alignments to that peptide. Update the BLAST table accordingly.

indexEpitopes(blast, index, aln.size)

Arguments

blast

BLAST alignment table to process.

index

Name of index peptide to process.

aln.size

Minimum length of alignment to consider from BLASTp alignments of 'data'.