calculate statistics for list of data

compute_stats_list(case, ctrl, case_rcp, ctrl_rcp, hit_thresh, rcp_thresh,
  stat_test = "Fisher", pval_correction = "BH")

Arguments

case

Case data list.

ctrl

Control data list.

case_rcp

Case RCP data list.

ctrl_rcp

Control RCP data list.

hit_thresh

Enrichment hit threshold.

rcp_thresh

RCP hit threshold.

stat_test

Statistical test. Currently supports "Fisher"

pval_correction

Multiple hypothesis pvalue correction method. BH default.